Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931611.1_cds_XP_016478379.1_70019
CDS Infomation

[gene=LOC107799747] [db_xref=GeneID:107799747] [protein=WEB family protein At3g02930, chloroplastic-like isoform X3] [protein_id=XP_016478379.1] [location=join(52128..52201,54186..54393,55140..57428)] [gbkey=CDS]
Sequence

ATGAGTAGGGTGAGCAGGGGAATAGCTAAATCTGATGCTCATTCACCCTCTCCTTTTCAT
AATTCACGTAATAGCACCAGATCAACTCCAAATGGAACTCCTAGTAATTCAACACCATCG
ACTCCTCGGATCAATAGAGTGAGCAGGGGAATAGCTAAATCTGATGCTGATTCACTCTCT
CCCTTGCAAAATTCACGTCGTTGTGTTGATAACTCTGCTATATCAGCTATTTCTAAGCTT
TCTGTGGAACGGCAGTCCTCTAAGCTCAGTACACTACCTGATAAAAAGCCTAAACGGATA
CTGAAACCATTAGAACTGCAAGCTGAATTAAATGTTGCTCAAGAAGGTCTTAAGAAGGCC
AAGGAGAAGTTGGCTTTGGTTGAAAAGGAAAAAGTCCAAGTTCTTGAAGAAATGAAGGAA
GCTCAGAAATTCGCTGAGGAATCTAATGAGAAGCTGAGAGAAGCTTTGGTAGCTCGAAAG
CAAGCTGAAGAGAACTCTGAAGTTGAAACATTTCGTGCTGTTGAGATGGAACAGGTGGGG
ATTGAAGCTGCTCAAAAGAAAGAAGAGGAATGGCAGAAGGAGATCGAAGCTGTTAGGAAC
CAACATGCTGTGGATGTGGCTGCTCTCCTCTCTGCCACACAGGAACTTCAACGGGCAAAG
CGTGAATTGGCCATGGCTTGTGATGTCAAAAATCAGGCGCTTAGCAGTGCTGAGGATGCC
ACAAAAATTGCTGATATGCATGCAGAGAAGGTGGAAATCCTCTCCACCGAGTTAGTGAGA
ATGAGATCTTTACTTGATTCCGGGAACTCCTGGAATGAAACAGAGATTCGTGAGAAGAAT
AAGCTGGTGGAAGATCTCAAACATGAGGTGGAGACGCTGAAAGAAGAACTAGAGAGAGCA
AAAACTTATGAAGCTAAAGTGGTGGAAAAAGAAGCTATGCTGAAGCAACTTAATGTCGAT
TTAGAGGCTGCTAAGATGGCTGAATCTTACGCACATAATCTGATAGAGGAGTGGAAGAAG
AAGGTTGAAGATTTAGAGGTTCAGGCTGATGAAGCGCATCATTTGGAGAGATCTGCATCA
GTAACTCTGGAGTCGGTCATGAAACAACTGGAAGCAAGCAAAGATTCATTGAATGATGCA
GAATCTGAGATTGCATGTCTCAAGGAGAATTTGGGCATAGCGGAGATGTCAATGGCAAGG
CAGAAAGGCGATCTTGAGGAATCAGAACATCGTGCTCAAATGGCCAAGGAAGAGGCTTCT
GAGATGAGGAAGAAGGTTGATTCTCTTATATCTGATCTTGAAATAGTGAAAGAGGAGAAG
ATTCAGGATATGGAGAATGAGAAACAAGCAGCAGCTAGTGTTCAAATCCTATTAGAAGAA
AAAAACAGACTTATAAATGATTTGGAAAGCTCCAAGGAGGAGGATGAAAAAAGTAAGAAG
GCAATGGAAAGTATGGTGTCAGCTCTGCATGAGGTTTCTACAGAGGCAAGAGAAGCCAAA
GAAAGGCTGTTGTCTAGCCAAGATGAACATCAACATTATGAAACACAACTTGAAGATTTG
AAGTTGGTACTGAAAGCAACAGAGGAGAAGTATGAAGACATGCTTGACGAAGCAAAAGAG
AAATTTGATTTTCTCACCATTTCGATTGAACAATCTAAGGATGAGCACCTGAAATTGAAG
GCTGAGTGGGAGGAAAAGGAGCTTCATTTGATGAGTTGCATGAAGAAAACCGAAGAAGAA
AATTCTTCAATGGAAAAAGAAATAAGCCGACTGGTAAATCTGCTAAAAGATGCTGAGGAA
GAAGCTTCTGCCAAAAAAGATGAAGAAGCTCATTTGAAGAATTCCCTAAAGGAAGCTGAA
TCTGAGGTAACCTATTTAAAGGAGGTTCTTGGCGAAGCAAAGGATGAGAGCATGAGGTTG
AAGGAATGTATAATAGACAAAGAAGATGAAATGCAGAATATTGTTCGCGAAAATGAGGAG
CTTCGAAGTAGAGAAGCTGCGTCATTGAAGAAAGTTGAGGAGTTGTCCTTGTTGCTTGAA
GGATCATTAGCCAAAAAGCAACCTGAAGCAAGTGGAGAGCTTTCTGATAGCGACAACGAT
ATGCTCCCAAGAGTAGTGACATTTTCTGAACAAAACGGAGAGGGAAGAGTAGAGAAGGCT
AAGATGGAACTTCCACCTTACCAATCTGAGCAACATGTTGAAGAAAAACCTGAAGATGTC
AACACCACCTCACATGATGAAGCTCTTAAGGCCTCTATAGTAGTACAGAATTCAAATGGA
GGACTAAGAGAGTTTGTGAGCAAAGAAAAGGAAGATGATAATGTAGCAGAAAGTGAGCGT
AAAATGTCGGAAAGCTGCAAGATTTGGGACAAAGACTTCTCTCAAGAATCAGAATTAACG
GCTAATAATGGTGGAGAGAGTTGTGACCAGATAAACGGGTTATCTTCAAAGGAAAACCAT
GAGAGTGGTGGCACATCTCCTACTAAGCAGCAAAGCCAGAAGAAGAAGAAACCTTTGTTT
CACAAATTTGGAAGCCTACTGAAGAAGAAAAGCACCAGCAGCCAGAAGTAA

Peptide Sequence

PEP ID

XP_016478379.1
PEP Infomation

PREDICTED: WEB family protein At3g02930, chloroplastic-like isoform X3 [Nicotiana tabacum]
Sequence

MSRVSRGIAKSDAHSPSPFHNSRNSTRSTPNGTPSNSTPSTPRINRVSRGIAKSDADSLS
PLQNSRRCVDNSAISAISKLSVERQSSKLSTLPDKKPKRILKPLELQAELNVAQEGLKKA
KEKLALVEKEKVQVLEEMKEAQKFAEESNEKLREALVARKQAEENSEVETFRAVEMEQVG
IEAAQKKEEEWQKEIEAVRNQHAVDVAALLSATQELQRAKRELAMACDVKNQALSSAEDA
TKIADMHAEKVEILSTELVRMRSLLDSGNSWNETEIREKNKLVEDLKHEVETLKEELERA
KTYEAKVVEKEAMLKQLNVDLEAAKMAESYAHNLIEEWKKKVEDLEVQADEAHHLERSAS
VTLESVMKQLEASKDSLNDAESEIACLKENLGIAEMSMARQKGDLEESEHRAQMAKEEAS
EMRKKVDSLISDLEIVKEEKIQDMENEKQAAASVQILLEEKNRLINDLESSKEEDEKSKK
AMESMVSALHEVSTEAREAKERLLSSQDEHQHYETQLEDLKLVLKATEEKYEDMLDEAKE
KFDFLTISIEQSKDEHLKLKAEWEEKELHLMSCMKKTEEENSSMEKEISRLVNLLKDAEE
EASAKKDEEAHLKNSLKEAESEVTYLKEVLGEAKDESMRLKECIIDKEDEMQNIVRENEE
LRSREAASLKKVEELSLLLEGSLAKKQPEASGELSDSDNDMLPRVVTFSEQNGEGRVEKA
KMELPPYQSEQHVEEKPEDVNTTSHDEALKASIVVQNSNGGLREFVSKEKEDDNVAESER
KMSESCKIWDKDFSQESELTANNGGESCDQINGLSSKENHESGGTSPTKQQSQKKKKPLF
HKFGSLLKKKSTSSQK

Transcript Sequence

Gene sequence data has not been registered.